CDS

Accession Number TCMCG006C54697
gbkey CDS
Protein Id XP_013725974.1
Location complement(join(29256130..29256462,29256544..29256636,29256713..29256931,29257035..29257103,29257209..29257714,29257717..29258926,29259017..29259167,29259240..29259477,29259551..29259606,29259683..29259945,29260027..29260169,29260268..29260322,29260404..29260475,29260543..29260635))
Gene LOC106429770
GeneID 106429770
Organism Brassica napus

Protein

Length 1167aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013870520.2
Definition LOW QUALITY PROTEIN: protein GIGANTEA-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Gigantea-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12124        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000302        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009636        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010378        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042542        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048578        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048582        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048586        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080167        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACATCGCCTACTTCATCTGAGAGGTGGACCGATGGTCTTCAGTTCTCTTCCTTGTTATGGTCTCCCCCACGTGACCCTCAACAACATAAGGATCAAGTCGTTGCTTATGTCGAATACTTTGGTCAGTTCACATCAGAGCAATTCCCTGATGATATTGCTGAGTTGGTCCGTAATCAGTATCCATCAACTGAGAAGCGGCTTTTGGATGATGTGTTGGCTATGTTTGTCCTCCATCATCCGGAGCATGGTCATGCTGTCATCCTTCCGATTATCTCATGTCTCATCGATGGCACCCTAGTGTACAGCAAGGAAGCTCATCCCTTCGCCTCTTTCATTTCTTTAGTTTCCCCAAATAGTGAGAATGACTATTCAGAGCAATGGGCTTTGGCGTGCGGAGAAATCCTACGCATCTTGACTCATTACAACCGTCCCATTTACAAGACGGAGCAGCAAAATGGAGAAACGGAGAGCAAAGCTTCTACTAGTGGGTCTCCTACGCTTTCAGAGGCTAAGGCTGTATCACCAGGACAGCATGAAAGGAAACCGCTAAGGCCTTTGTCTCCATGGATCAGTGATATACTACTCGCTGCTCCCCTTGGTATTAGAAGTGACTACTTTCGTTGGTGTAGTGGTGTTATGGGTAAATATGCTGCTGGAGAGCTCAAGCCACCTACTATTGCTACTCGAGGATCTGGTAAACATCCTCAATATATGCCTTCCACGCCAAGATGGGCGGTTGCTAATGGAGCTGGTGTCATACTGAGTGTTTGTGATGATGAAGTTGCTCGGTACGAGACTGCTACGTTAACAGCGGTTGCTGTCCCTGCACTTCTCCTTCCTCCCCCAACGACATCCTTAGATGAGCATTTAGTTGCTGGCCTTCCAGCTCTTGAGCCTTATGCACGTTTGTTTCACAGATATTATGCGATTGCAACTCCAAGTGCTACTCAGAGACTTCTTCTTGGACTCTTGGAAGCACCACCGTCTTGGGCTCCAGATGCACTTGATGCTGCTGTACAGCTTGTGGAGCTTCTCCGAGCTGCTGAGGATTATGCATCTGGTGTAAGGCTACCAAGGAACTGGATGCATTTGCACTTCTTGCGTGCAATAGGAATCGCCATGTCTATGAGGGCAGGCGTTGCTGCTGACGCTGCAGCCGCTTTGCTTTTCCGCATACTCTCGCAGCCGGCACTGCTTTTTCCTCCGCTAAGCCAAGCTGAGGGAGTAGAAATCAAACACGCTCCTATTGGTGGCTACGGTTCAAATTACAGAAAGCAGATAGAAGTTCCTGCAGCAGAAGCAACCATTGAAGCCACTGCACAAGGAATAGCCTCAATGCTTTGTGCTCACGGACCTGAAGTGGAGTGGAGGATCTGCACTATATGGGAAGCTGCCTATGGATTGATCCCTTTAAACTCCTCAGCCGTTGATCTCCCTGAGATCATTGTCGCCACCCCGCTGCAACCTCCCATCTTGTCATGGAACCTATACATCCCACTCCTCAAAGTACTCGAGTATCTTCCACGTGGGAGTCCTTCCGAAGCATGCTTGATGAAGATATTCGTCGCCACGGTGGAAACAATCCTCAGCCGAACTTTCCCGCCAGAGACTTCTATCAGGAAAGCTAGAGCGAGTTTAGCCACGAGATCATCAGCGACCAAAAACCTCGCTATGGCTGAGCTTCGAGCTATGGTTCATGCTCTCTTCTTGGAATCATGCGCTGGCGTGGAGATAGCTTCGCGCCTGCTTTTCGTTGTGTTGACTGTGTGTGTTAGCCATGAAGCGCAGTCTAGTGGGAGCAAGAGACGGAGAAGCGAAGAAGATGCTACTGCAGAGGAGAATCAAGACAATCAAACTAGTAACCGTAAGAGTAGGAACGTCAAGGGACAAGGACCTGTGGCGGCGTTTGATTCGTACGTTCTCGCTGCTGTCTGTGCTCTCGCCTGTGAGGTTCAGCTGTATCCTATGATCTCCGGAGGAGGGAACTTCTCCAACTCTGCAGTGGCTGCAACCATTACAAAGTCTGTGAAGATAAACGGTTCATCTAACGAGTACGGAGCTGGGATTGACTCTGCAATCAAGCACACACGCCGCATCTTAGCGATTCTCGAGGCGCTCTTTTCGTTGAAGCCATCTTCTGTGGGGACTCCGTGGAGTTACAGCTCTAGCGAGATAGTTGCTGCAGCCATGGTCGCAGCTCACATCTCCGAACTGTTCAGACGCTCAAAGGCCTTGACGCATGCCTTGTCTGGTTTGATGAGATGCAAATGGGACAAGGCGGCGTCGTTGTATAACCTCATCGATGTTCACAGCAAAGTTGTAGCATCCATTGTGGACAAAGCTGAACCCTTAGAAGCGTACCTTAAGAACGCACCGGTCCAGAAGGATTCGCTGGCTTGTCTTAACTGGAAACAACAGAACAACACATCATCAGCAGCAGGGTTTGGTACAGCGGCGGTGACGTCCTCGTCACGTAATGAAATGGCTCCGAGAGGAGGTAACCATAAGTATGCTAGGCATTCAGATGAAGGCTCAGGGAGTAGATCATCATCAGAGAAGGGCATCAAAGATCTGCTGTTGGATGCTTCTGATCTAGCGAATTTCCTCACGGCTGATAGGCTAGCAGGGTTTTACCGTGGTACACAAGTTCTTTTGAGGTCGATACTTGCTGAGAAACCGGAGCTTTCTTTCTCCGTTGTTTCGCTGTTGTGGCACAAACTGATCGCTTCTCCTGAGATCCAGCCCACAGCCGAAAGCACATCTGCTCAGCAAGGATGGAGACAGGTAGTTGATGCACTATGCAATGTGGTATCTGCAACGCCAGCAAAAGCAGCTGCAGCCGTTGTTCTTCAGGCTGAGAGAGAGTTGCAGCCTTGGATAGCCAAAGATGATGAAGAAGGTCAGAAAATGTGGAAAATAAACCAAAGGATAGTGAAAGTGATGGTGGAACTCATGAGGAATCATGACAGGCCTGAGTCACTGGTGATTCTGGCAAGTGCATCTGATCTCCTTCTGAGAGCAACTGATGGAATGCTTGTTGATGGAGAAGCTTGTACTTTACCTCAACTTGAGCTACTTGAAGCTACAGCAAGAGCAATACAGCCAGTGTTAGCTTGGGGACCATCTGGACTAGCAGTAGTTGACGGCTTATCAAATCTATTGAAGTGTCGTCTGCCGGCAACAATACGGTGCCTCTCACACCCAAGTGCACACGTACGTGCCTTGAGCACATCAGTACTACGAGACATCATGAACCAAAGCGGCATAACCACCACCAAGGCAACTCCAAAACCGCCGCCAACAATAACAACAGAGAAGAACGGAACGGACAGCCCGTCGTACAGGTTCTTCAACGCGGCGGCAATAGACTGGAAAGCAGACATACAAAAATGTTTGAACTGGGAAGCGCACAGCTTGCTGTCGACGACAATGCCGACACAGTTTCTTGACACGGCGGCTCGGGAATTAGGATGTACCATATCAATGTCGTCCCAATAA
Protein:  
MTSPTSSERWTDGLQFSSLLWSPPRDPQQHKDQVVAYVEYFGQFTSEQFPDDIAELVRNQYPSTEKRLLDDVLAMFVLHHPEHGHAVILPIISCLIDGTLVYSKEAHPFASFISLVSPNSENDYSEQWALACGEILRILTHYNRPIYKTEQQNGETESKASTSGSPTLSEAKAVSPGQHERKPLRPLSPWISDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTIATRGSGKHPQYMPSTPRWAVANGAGVILSVCDDEVARYETATLTAVAVPALLLPPPTTSLDEHLVAGLPALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGVRLPRNWMHLHFLRAIGIAMSMRAGVAADAAAALLFRILSQPALLFPPLSQAEGVEIKHAPIGGYGSNYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLNSSAVDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVETILSRTFPPETSIRKARASLATRSSATKNLAMAELRAMVHALFLESCAGVEIASRLLFVVLTVCVSHEAQSSGSKRRRSEEDATAEENQDNQTSNRKSRNVKGQGPVAAFDSYVLAAVCALACEVQLYPMISGGGNFSNSAVAATITKSVKINGSSNEYGAGIDSAIKHTRRILAILEALFSLKPSSVGTPWSYSSSEIVAAAMVAAHISELFRRSKALTHALSGLMRCKWDKEXASLYNLIDVHSKVVASIVDKAEPLEAYLKNAPVQKDSLACLNWKQQNNTSSAAGFGTAAVTSSSRNEMAPRGGNHKYARHSDEGSGSRSSSEKGIKDLLLDASDLANFLTADRLAGFYRGTQVLLRSILAEKPELSFSVVSLLWHKLIASPEIQPTAESTSAQQGWRQVVDALCNVVSATPAKAAAAVVLQAERELQPWIAKDDEEGQKMWKINQRIVKVMVELMRNHDRPESLVILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIMNQSGITTTKATPKPPPTITTEKNGTDSPSYRFFNAAAIDWKADIQKCLNWEAHSLLSTTMPTQFLDTAARELGCTISMSSQ